PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01528.1.g00180.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 284aa    MW: 29584.7 Da    PI: 9.1172
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01528.1.g00180.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.91.1e-12112155955
                           AP2   9 dkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   ++++grW++eIr p++   r++ ++g+f t+eeAa a++aa  +++g
  Zpz_sc01528.1.g00180.1.am.mk 112 RRRQGRWASEIRMPRT---RAKLWIGTFATPEEAALAYDAAVFCFYG 155
                                   678**********965...4*********************999887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103217.372104167IPR001471AP2/ERF domain
CDDcd000181.21E-19110169No hitNo description
PfamPF008473.3E-7112155IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.1E-19112168IPR001471AP2/ERF domain
SMARTSM003805.9E-18112173IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-13112167IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MRRLAPPPQY HALSSHLSAS GEIFATASPS TTPPLLPSLS SFDLLVVRGS CLVPFLLVAS  60
VVSMAGAAAS RATGVAGMGN GRSTAPQGNN NGALSGAGGG GGPKNLGWLG ARRRQGRWAS  120
EIRMPRTRAK LWIGTFATPE EAALAYDAAV FCFYGARVPD SRRLNFPTAP RPNISENMRV  180
RLTVSNIKAI AEHYARTLAV YLVPPPPPVL LPVPAPAPAV PAPMMVNEAP VEATAASAAG  240
AASATTNHGN VNAMDVDSAA ATVEDYFLNF NPGEFDFDHL MADI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002444750.12e-37hypothetical protein SORBIDRAFT_07g027250
TrEMBLC5YIM22e-37C5YIM2_SORBI; Putative uncharacterized protein Sb07g027250
STRINGSb07g027250.16e-37(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54442555
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.12e-17ERF family protein